Class DirichletMultinomial
Inherits From: Distribution
Aliases:
- Class
tf.contrib.distributions.DirichletMultinomial - Class
tf.distributions.DirichletMultinomial
Defined in tensorflow/python/ops/distributions/dirichlet_multinomial.py.
Dirichlet-Multinomial compound distribution.
The Dirichlet-Multinomial distribution is parameterized by a (batch of)
length-K concentration vectors (K > 1) and a total_count number of
trials, i.e., the number of trials per draw from the DirichletMultinomial. It
is defined over a (batch of) length-K vector counts such that
tf.reduce_sum(counts, -1) = total_count. The Dirichlet-Multinomial is
identically the Beta-Binomial distribution when K = 2.
Mathematical Details
The Dirichlet-Multinomial is a distribution over K-class counts, i.e., a
length-K vector of non-negative integer counts = n = [n_0, ..., n_{K-1}].
The probability mass function (pmf) is,
pmf(n; alpha, N) = Beta(alpha + n) / (prod_j n_j!) / Z
Z = Beta(alpha) / N!
where:
concentration = alpha = [alpha_0, ..., alpha_{K-1}],alpha_j > 0,total_count = N,Na positive integer,N!isNfactorial, and,Beta(x) = prod_j Gamma(x_j) / Gamma(sum_j x_j)is the multivariate beta function, and,Gammais the gamma function.
Dirichlet-Multinomial is a compound distribution, i.e., its samples are generated as follows.
- Choose class probabilities:
probs = [p_0,...,p_{K-1}] ~ Dir(concentration) - Draw integers:
counts = [n_0,...,n_{K-1}] ~ Multinomial(total_count, probs)
The last concentration dimension parametrizes a single Dirichlet-Multinomial
distribution. When calling distribution functions (e.g., dist.prob(counts)),
concentration, total_count and counts are broadcast to the same shape.
The last dimension of counts corresponds single Dirichlet-Multinomial
distributions.
Distribution parameters are automatically broadcast in all functions; see examples for details.
Pitfalls
The number of classes, K, must not exceed:
- the largest integer representable by self.dtype, i.e.,
2**(mantissa_bits+1) (IEE754),
- the maximum Tensor index, i.e., 2**31-1.
In other words,
K <= min(2**31-1, {
tf.float16: 2**11,
tf.float32: 2**24,
tf.float64: 2**53 }[param.dtype])
Examples
alpha = [1., 2., 3.]
n = 2.
dist = DirichletMultinomial(n, alpha)
Creates a 3-class distribution, with the 3rd class is most likely to be drawn. The distribution functions can be evaluated on counts.
# counts same shape as alpha.
counts = [0., 0., 2.]
dist.prob(counts) # Shape []
# alpha will be broadcast to [[1., 2., 3.], [1., 2., 3.]] to match counts.
counts = [[1., 1., 0.], [1., 0., 1.]]
dist.prob(counts) # Shape [2]
# alpha will be broadcast to shape [5, 7, 3] to match counts.
counts = [[...]] # Shape [5, 7, 3]
dist.prob(counts) # Shape [5, 7]
Creates a 2-batch of 3-class distributions.
alpha = [[1., 2., 3.], [4., 5., 6.]] # Shape [2, 3]
n = [3., 3.]
dist = DirichletMultinomial(n, alpha)
# counts will be broadcast to [[2., 1., 0.], [2., 1., 0.]] to match alpha.
counts = [2., 1., 0.]
dist.prob(counts) # Shape [2]
__init__
__init__(
total_count,
concentration,
validate_args=False,
allow_nan_stats=True,
name='DirichletMultinomial'
)
Initialize a batch of DirichletMultinomial distributions. (deprecated)
Args:
total_count: Non-negative floating point tensor, whose dtype is the same asconcentration. The shape is broadcastable to[N1,..., Nm]withm >= 0. Defines this as a batch ofN1 x ... x Nmdifferent Dirichlet multinomial distributions. Its components should be equal to integer values.concentration: Positive floating point tensor, whose dtype is the same asnwith shape broadcastable to[N1,..., Nm, K]m >= 0. Defines this as a batch ofN1 x ... x NmdifferentKclass Dirichlet multinomial distributions.validate_args: Pythonbool, defaultFalse. WhenTruedistribution parameters are checked for validity despite possibly degrading runtime performance. WhenFalseinvalid inputs may silently render incorrect outputs.allow_nan_stats: Pythonbool, defaultTrue. WhenTrue, statistics (e.g., mean, mode, variance) use the value "NaN" to indicate the result is undefined. WhenFalse, an exception is raised if one or more of the statistic's batch members are undefined.name: Pythonstrname prefixed to Ops created by this class.
Properties
allow_nan_stats
Python bool describing behavior when a stat is undefined.
Stats return +/- infinity when it makes sense. E.g., the variance of a Cauchy distribution is infinity. However, sometimes the statistic is undefined, e.g., if a distribution's pdf does not achieve a maximum within the support of the distribution, the mode is undefined. If the mean is undefined, then by definition the variance is undefined. E.g. the mean for Student's T for df = 1 is undefined (no clear way to say it is either + or - infinity), so the variance = E[(X - mean)**2] is also undefined.
Returns:
allow_nan_stats: Pythonbool.
batch_shape
Shape of a single sample from a single event index as a TensorShape.
May be partially defined or unknown.
The batch dimensions are indexes into independent, non-identical parameterizations of this distribution.
Returns:
batch_shape:TensorShape, possibly unknown.
concentration
Concentration parameter; expected prior counts for that coordinate.
dtype
The DType of Tensors handled by this Distribution.
event_shape
Shape of a single sample from a single batch as a TensorShape.
May be partially defined or unknown.
Returns:
event_shape:TensorShape, possibly unknown.
name
Name prepended to all ops created by this Distribution.
parameters
Dictionary of parameters used to instantiate this Distribution.
reparameterization_type
Describes how samples from the distribution are reparameterized.
Currently this is one of the static instances
distributions.FULLY_REPARAMETERIZED
or distributions.NOT_REPARAMETERIZED.
Returns:
An instance of ReparameterizationType.
total_concentration
Sum of last dim of concentration parameter.
total_count
Number of trials used to construct a sample.
validate_args
Python bool indicating possibly expensive checks are enabled.
Methods
tf.distributions.DirichletMultinomial.batch_shape_tensor
batch_shape_tensor(name='batch_shape_tensor')
Shape of a single sample from a single event index as a 1-D Tensor.
The batch dimensions are indexes into independent, non-identical parameterizations of this distribution.
Args:
name: name to give to the op
Returns:
batch_shape:Tensor.
tf.distributions.DirichletMultinomial.cdf
cdf(
value,
name='cdf'
)
Cumulative distribution function.
Given random variable X, the cumulative distribution function cdf is:
cdf(x) := P[X <= x]
Args:
value:floatordoubleTensor.name: Pythonstrprepended to names of ops created by this function.
Returns:
cdf: aTensorof shapesample_shape(x) + self.batch_shapewith values of typeself.dtype.
tf.distributions.DirichletMultinomial.copy
copy(**override_parameters_kwargs)
Creates a deep copy of the distribution.
Args:
**override_parameters_kwargs: String/value dictionary of initialization arguments to override with new values.
Returns:
distribution: A new instance oftype(self)initialized from the union of self.parameters and override_parameters_kwargs, i.e.,dict(self.parameters, **override_parameters_kwargs).
tf.distributions.DirichletMultinomial.covariance
covariance(name='covariance')
Covariance.
Covariance is (possibly) defined only for non-scalar-event distributions.
For example, for a length-k, vector-valued distribution, it is calculated
as,
Cov[i, j] = Covariance(X_i, X_j) = E[(X_i - E[X_i]) (X_j - E[X_j])]
where Cov is a (batch of) k x k matrix, 0 <= (i, j) < k, and E
denotes expectation.
Alternatively, for non-vector, multivariate distributions (e.g.,
matrix-valued, Wishart), Covariance shall return a (batch of) matrices
under some vectorization of the events, i.e.,
Cov[i, j] = Covariance(Vec(X)_i, Vec(X)_j) = [as above]
where Cov is a (batch of) k' x k' matrices,
0 <= (i, j) < k' = reduce_prod(event_shape), and Vec is some function
mapping indices of this distribution's event dimensions to indices of a
length-k' vector.
Additional documentation from DirichletMultinomial:
The covariance for each batch member is defined as the following:
Var(X_j) = n * alpha_j / alpha_0 * (1 - alpha_j / alpha_0) *
(n + alpha_0) / (1 + alpha_0)
where concentration = alpha and
total_concentration = alpha_0 = sum_j alpha_j.
The covariance between elements in a batch is defined as:
Cov(X_i, X_j) = -n * alpha_i * alpha_j / alpha_0 ** 2 *
(n + alpha_0) / (1 + alpha_0)
Args:
name: Pythonstrprepended to names of ops created by this function.
Returns:
covariance: Floating-pointTensorwith shape[B1, ..., Bn, k', k']where the firstndimensions are batch coordinates andk' = reduce_prod(self.event_shape).
tf.distributions.DirichletMultinomial.cross_entropy
cross_entropy(
other,
name='cross_entropy'
)
Computes the (Shannon) cross entropy.
Denote this distribution (self) by P and the other distribution by
Q. Assuming P, Q are absolutely continuous with respect to
one another and permit densities p(x) dr(x) and q(x) dr(x), (Shanon)
cross entropy is defined as:
H[P, Q] = E_p[-log q(X)] = -int_F p(x) log q(x) dr(x)
where F denotes the support of the random variable X ~ P.
Args:
other:tfp.distributions.Distributioninstance.name: Pythonstrprepended to names of ops created by this function.
Returns:
cross_entropy:self.dtypeTensorwith shape[B1, ..., Bn]representingndifferent calculations of (Shanon) cross entropy.
tf.distributions.DirichletMultinomial.entropy
entropy(name='entropy')
Shannon entropy in nats.
tf.distributions.DirichletMultinomial.event_shape_tensor
event_shape_tensor(name='event_shape_tensor')
Shape of a single sample from a single batch as a 1-D int32 Tensor.
Args:
name: name to give to the op
Returns:
event_shape:Tensor.
tf.distributions.DirichletMultinomial.is_scalar_batch
is_scalar_batch(name='is_scalar_batch')
Indicates that batch_shape == [].
Args:
name: Pythonstrprepended to names of ops created by this function.
Returns:
is_scalar_batch:boolscalarTensor.
tf.distributions.DirichletMultinomial.is_scalar_event
is_scalar_event(name='is_scalar_event')
Indicates that event_shape == [].
Args:
name: Pythonstrprepended to names of ops created by this function.
Returns:
is_scalar_event:boolscalarTensor.
tf.distributions.DirichletMultinomial.kl_divergence
kl_divergence(
other,
name='kl_divergence'
)
Computes the Kullback--Leibler divergence.
Denote this distribution (self) by p and the other distribution by
q. Assuming p, q are absolutely continuous with respect to reference
measure r, the KL divergence is defined as:
KL[p, q] = E_p[log(p(X)/q(X))]
= -int_F p(x) log q(x) dr(x) + int_F p(x) log p(x) dr(x)
= H[p, q] - H[p]
where F denotes the support of the random variable X ~ p, H[., .]
denotes (Shanon) cross entropy, and H[.] denotes (Shanon) entropy.
Args:
other:tfp.distributions.Distributioninstance.name: Pythonstrprepended to names of ops created by this function.
Returns:
kl_divergence:self.dtypeTensorwith shape[B1, ..., Bn]representingndifferent calculations of the Kullback-Leibler divergence.
tf.distributions.DirichletMultinomial.log_cdf
log_cdf(
value,
name='log_cdf'
)
Log cumulative distribution function.
Given random variable X, the cumulative distribution function cdf is:
log_cdf(x) := Log[ P[X <= x] ]
Often, a numerical approximation can be used for log_cdf(x) that yields
a more accurate answer than simply taking the logarithm of the cdf when
x << -1.
Args:
value:floatordoubleTensor.name: Pythonstrprepended to names of ops created by this function.
Returns:
logcdf: aTensorof shapesample_shape(x) + self.batch_shapewith values of typeself.dtype.
tf.distributions.DirichletMultinomial.log_prob
log_prob(
value,
name='log_prob'
)
Log probability density/mass function.
Additional documentation from DirichletMultinomial:
For each batch of counts,
value = [n_0, ..., n_{K-1}], P[value] is the probability that after
sampling self.total_count draws from this Dirichlet-Multinomial distribution,
the number of draws falling in class j is n_j. Since this definition is
exchangeable;
different sequences have the same counts so the probability includes a
combinatorial coefficient.
Args:
value:floatordoubleTensor.name: Pythonstrprepended to names of ops created by this function.
Returns:
log_prob: aTensorof shapesample_shape(x) + self.batch_shapewith values of typeself.dtype.
tf.distributions.DirichletMultinomial.log_survival_function
log_survival_function(
value,
name='log_survival_function'
)
Log survival function.
Given random variable X, the survival function is defined:
log_survival_function(x) = Log[ P[X > x] ]
= Log[ 1 - P[X <= x] ]
= Log[ 1 - cdf(x) ]
Typically, different numerical approximations can be used for the log
survival function, which are more accurate than 1 - cdf(x) when x >> 1.
Args:
value:floatordoubleTensor.name: Pythonstrprepended to names of ops created by this function.
Returns:
Tensor of shape sample_shape(x) + self.batch_shape with values of type
self.dtype.
tf.distributions.DirichletMultinomial.mean
mean(name='mean')
Mean.
tf.distributions.DirichletMultinomial.mode
mode(name='mode')
Mode.
tf.distributions.DirichletMultinomial.param_shapes
param_shapes(
cls,
sample_shape,
name='DistributionParamShapes'
)
Shapes of parameters given the desired shape of a call to sample().
This is a class method that describes what key/value arguments are required
to instantiate the given Distribution so that a particular shape is
returned for that instance's call to sample().
Subclasses should override class method _param_shapes.
Args:
sample_shape:Tensoror python list/tuple. Desired shape of a call tosample().name: name to prepend ops with.
Returns:
dict of parameter name to Tensor shapes.
tf.distributions.DirichletMultinomial.param_static_shapes
param_static_shapes(
cls,
sample_shape
)
param_shapes with static (i.e. TensorShape) shapes.
This is a class method that describes what key/value arguments are required
to instantiate the given Distribution so that a particular shape is
returned for that instance's call to sample(). Assumes that the sample's
shape is known statically.
Subclasses should override class method _param_shapes to return
constant-valued tensors when constant values are fed.
Args:
sample_shape:TensorShapeor python list/tuple. Desired shape of a call tosample().
Returns:
dict of parameter name to TensorShape.
Raises:
ValueError: ifsample_shapeis aTensorShapeand is not fully defined.
tf.distributions.DirichletMultinomial.prob
prob(
value,
name='prob'
)
Probability density/mass function.
Additional documentation from DirichletMultinomial:
For each batch of counts,
value = [n_0, ..., n_{K-1}], P[value] is the probability that after
sampling self.total_count draws from this Dirichlet-Multinomial distribution,
the number of draws falling in class j is n_j. Since this definition is
exchangeable;
different sequences have the same counts so the probability includes a
combinatorial coefficient.
Args:
value:floatordoubleTensor.name: Pythonstrprepended to names of ops created by this function.
Returns:
prob: aTensorof shapesample_shape(x) + self.batch_shapewith values of typeself.dtype.
tf.distributions.DirichletMultinomial.quantile
quantile(
value,
name='quantile'
)
Quantile function. Aka "inverse cdf" or "percent point function".
Given random variable X and p in [0, 1], the quantile is:
quantile(p) := x such that P[X <= x] == p
Args:
value:floatordoubleTensor.name: Pythonstrprepended to names of ops created by this function.
Returns:
quantile: aTensorof shapesample_shape(x) + self.batch_shapewith values of typeself.dtype.
tf.distributions.DirichletMultinomial.sample
sample(
sample_shape=(),
seed=None,
name='sample'
)
Generate samples of the specified shape.
Note that a call to sample() without arguments will generate a single
sample.
Args:
sample_shape: 0D or 1Dint32Tensor. Shape of the generated samples.seed: Python integer seed for RNGname: name to give to the op.
Returns:
samples: aTensorwith prepended dimensionssample_shape.
tf.distributions.DirichletMultinomial.stddev
stddev(name='stddev')
Standard deviation.
Standard deviation is defined as,
stddev = E[(X - E[X])**2]**0.5
where X is the random variable associated with this distribution, E
denotes expectation, and stddev.shape = batch_shape + event_shape.
Args:
name: Pythonstrprepended to names of ops created by this function.
Returns:
stddev: Floating-pointTensorwith shape identical tobatch_shape + event_shape, i.e., the same shape asself.mean().
tf.distributions.DirichletMultinomial.survival_function
survival_function(
value,
name='survival_function'
)
Survival function.
Given random variable X, the survival function is defined:
survival_function(x) = P[X > x]
= 1 - P[X <= x]
= 1 - cdf(x).
Args:
value:floatordoubleTensor.name: Pythonstrprepended to names of ops created by this function.
Returns:
Tensor of shape sample_shape(x) + self.batch_shape with values of type
self.dtype.
tf.distributions.DirichletMultinomial.variance
variance(name='variance')
Variance.
Variance is defined as,
Var = E[(X - E[X])**2]
where X is the random variable associated with this distribution, E
denotes expectation, and Var.shape = batch_shape + event_shape.
Args:
name: Pythonstrprepended to names of ops created by this function.
Returns:
variance: Floating-pointTensorwith shape identical tobatch_shape + event_shape, i.e., the same shape asself.mean().